Nurturing Life Sciences
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#Unit 3. Fundamental Processes
Model of Intrinsic Termination
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Termination requires that all hydrogen bonds holding the RNA–DNA hybrid together must be broken, after which the DNA duplex reforms.
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he ability of the enzyme to terminate in vitro, however, is strongly influenced by parameters such as the ionic strength and temperature at which the reaction is performed.
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Termination depends on the RNA product and is not determined simply by scrutiny of the DNA sequence during transcription.
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Intrinsic terminators—that is, those that do not require auxiliary rho factor (r), as described shortly—require a GC–rich hairpin to form in the secondary structure of the RNA being transcribed.
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Rho-dependent terminators are defined by the need for addition of rho factor in vitro, and mutations show that the factor is involved in termination in vivo.