Nurturing Life Sciences
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#Unit 2. Cellular Organization
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Individual nucleosomes can be obtained by treating chromatin with the endonuclease micrococcal nuclease (MNase), which cuts the DNA between nucleosomes, a region known as linker DNA.
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Mononucleosomes typically have 200 bp DNA. End-trimming reduces the length of DNA first to 165 bp and then generates core particles with 146 bp.
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Mnase digestion result on centrifugation and electrophoresis
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Core DNA has an invariant length of 146 bp the minimum length of DNA needed to form a stable monomeric nucleosome, and is relatively resistant to digestion by nucleases.
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Core DNA invariant length of 146 bp contains core and linker histones so Mnase cuts after H1 binding site.