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TLS Online TPP Program

#Question id: 10131

The detailed chemical mechanism of the oxidation of water to O2 is not yet well understood, but with structural information shows_one electron carrier, generally identified as Yz, functions between the oxygen-evolving complex and P680 to function in this region, Yz needs to have a very strong tendency to retain its electrons, this species has been identified as;

#Section 2: General Biology
  1. A radical formed from a tyrosine residue in the D1 protein of the PSII reaction center
  2. Formed from Aromatic amino acid residue in the D2 protein of the PSII reaction center
  3. A radical formed from a Histidine residue because of its +ve charge in the D1 protein of the PSII reaction center
  4. A radical formed from a tyrosine residue in the D2 protein of the PSII reaction center
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TLS Online TPP Program

#Question id: 15138

#Section 7: Recombinant DNA technology and Other Tools in Biotechnology

Match the items in group 1 with an appropriate description in group 2.
Group 1                                                                Group 2
(P) SWISS PROT                                 (1) derived protein structure database 
(Q) Local alignment                          (2) protein sequence database
(R) CATH                                             (3) GAP
(S) Global alignment                        (4) Smith–Waterman algorithm
TLS Online TPP Program

#Question id: 15139

#Section 7: Recombinant DNA technology and Other Tools in Biotechnology

Which one of the following is NOT a structure or structurally derived database?
TLS Online TPP Program

#Question id: 15140

#Section 7: Recombinant DNA technology and Other Tools in Biotechnology

Two types of pair-wise sequence alignment of the same hypothetical protein sequence fragments are illustrated in the figure below. Vertical bars between the sequences indicate the presence of identical amino acids. * symbols in Figure Y indicate residues not included in the alignment.





Which one of the following is correct?
TLS Online TPP Program

#Question id: 15141

#Section 7: Recombinant DNA technology and Other Tools in Biotechnology

An alignment of two protein sequences is given below:

Sequence A         A G A A C D E V I G
Sequence B         A G E Y C D A V I G
The similarity score (%) for the above alignment will be:
TLS Online TPP Program

#Question id: 15142

#Section 7: Recombinant DNA technology and Other Tools in Biotechnology

Dot matrix analysis of the amino acid sequences of lambda phage cI (horizontal sequence) and phage P22 c2 (vertical sequence) repressors is shown below. Which one of the following is correct?
TLS Online TPP Program

#Question id: 15143

#Section 7: Recombinant DNA technology and Other Tools in Biotechnology

Which one of the following is a depiction of the GenBank sequence entry format?